CAS 1309457-02-0

(S)-2-(4-(1-(26-azido-3,6,9,12,15,18,21,24-octaoxahexacosanyl)piperidin-4-yl) butyramido)-N-((S)-1-((4-(hydroxymethyl)phenyl)amino)-1-oxoprop-2-yl)-3-methylbutyramide

Azides & Alkyne Building Blocks

About This Compound

Azides and alkynes are the foundational reagents of copper-catalyzed azide-alkyne cycloaddition (CuAAC) — the quintessential click reaction that yields 1,2,3-triazole linkages with near-perfect regioselectivity. Azide-functionalized building blocks are also compatible with strain-promoted azide-alkyne cycloaddition (SPAAC) for copper-free bioorthogonal applications. These compounds are essential tools for bioconjugation, drug discovery, materials science, and chemical proteomics.

Related Reactions: CuAAC · SPAAC · Staudinger Ligation
Molecular FormulaC25H43N3O11S Molecular Weight593.696 g/mol InChIKeyCMVPKXUVTGBHFQ-UHFFFAOYSA-N CAS Registry1309457-02-0 Literature Refs17 references

Synthesis Routes

Showing 3 of 10 available routes, sorted by yield.

Route 1

1 step Yield: 600 mg
26-azido-3,6,9,12,15,18,21,24-octaoxahexacosyl 4-methylbenzenesulfonate
CAS 1309457-02-0
C25H43N3O11S
+
(S)-N-(4-(hydroxymethyl)phenyl)-2-((S)-3-methyl-2-(4-(piperidin-4-yl)butanamido)butanamido)-5-ureidopentanamide
CAS 2878441-23-5
C27H44N6O5
(S)-2-(4-(1-(26-azido-3,6,9,12,15,18,21,24-octaoxahexacosanyl)piperidin-4-yl) butyramido)-N-((S)-1-((4-(hydroxymethyl)phenyl)amino)-1-oxoprop-2-yl)-3-methylbutyramide
Conditions With potassium carbonate In N,N-dimethyl-formamide at 80℃;
Reference Current Patent Assignee: KLUS PHARMA - US2024/269312, 2024, A1 Location in patent: Paragraph 0182; 0189-0191
Source Reaxys

Route 2

1 step Yield: 586 mg
26-azido-3,6,9,12,15,18,21,24-octaoxahexacosyl 4-methylbenzenesulfonate
CAS 1309457-02-0
C25H43N3O11S
+
(S)-N-((S)-1-((4-(hydroxymethyl)phenyl)amino)-1-oxoprop-2-yl)-3-methyl-2-(4-(piperidin-4-yl)butyrylamido)butyramide trifluoroacetate
CAS 2746343-78-0
C2HF3O2*C24H38N4O4
(S)-2-(4-(1-(26-azido-3,6,9,12,15,18,21,24-octaoxahexacosanyl)piperidin-4-yl) butyramido)-N-((S)-1-((4-(hydroxymethyl)phenyl)amino)-1-oxoprop-2-yl)-3-methylbutyramide
Conditions With potassium carbonate In acetonitrile at 16℃;
Reference Current Patent Assignee: SICHUAN KELUN BIOTECH BIOPHARMACEUTICAL - US2023/338565, 2023, A1 Location in patent: Paragraph 0346; 0355-0356
Source Reaxys

Route 3

1 step Yield: 500 mg
26-azido-3,6,9,12,15,18,21,24-octaoxahexacosyl 4-methylbenzenesulfonate
CAS 1309457-02-0
C25H43N3O11S
+
(S)-N-((S)-1-((4-(hydroxymethyl)phenyl)amino)-1-oxopropan-2-yl)-3-methyl-2-(4-(piperidin-4-yl)butyrylamido)butanamide
CAS 2746343-77-9
C24H38N4O4
(S)-2-(4-(1-(26-azido-3,6,9,12,15,18,21,24-octaoxahexacosanyl)piperidin-4-yl) butyramido)-N-((S)-1-((4-(hydroxymethyl)phenyl)amino)-1-oxoprop-2-yl)-3-methylbutyramide
Conditions With potassium carbonate In N,N-dimethyl-formamide at 80℃;
Reference Current Patent Assignee: KLUS PHARMA - US2024/269312, 2024, A1 Location in patent: Paragraph 0218; 0225-0226
Source Reaxys
7 additional routes available in the full dataset. Contact us for complete synthesis route data.

Related Compounds

Other Azides & Alkyne Building Blocks in our catalog:

Frequently Asked Questions

Are organic azides safe to handle?

Low-molecular-weight organic azides (especially those with high nitrogen content) can be shock-sensitive and potentially explosive. Compounds where the ratio (C + O) / N < 3 should be handled with extreme caution. For routine lab work, azides with molecular weight > 200 Da and low nitrogen-to-carbon ratios are generally safe under standard conditions. Always scale up cautiously and avoid heating neat azides.

What copper catalyst systems work best for CuAAC?

The most widely used CuAAC catalyst systems include CuSO₄/sodium ascorbate (in situ generation of Cu(I)), CuI with THPTA or BTTAA ligands for biological applications, and pre-formed Cu(I) complexes such as [Cu(CH₃CN)₄]PF₆. Ligand choice is critical for biocompatibility — BTTAA and THPTA protect biomolecules from Cu(I)-mediated oxidative damage.

How should alkyne compounds be stored?

Terminal alkynes are susceptible to oxidative coupling (Glaser coupling) when exposed to air and copper contaminants. Store under inert atmosphere at −20 °C. Solid alkynes are generally more stable than liquid ones. Cyclooctyne derivatives (DIBO, DBCO, BCN) are light-sensitive and should be stored in amber vials at −20 °C.

Can I use CuAAC for live-cell labeling?

Standard CuAAC is generally not suitable for live-cell applications due to Cu(I) cytotoxicity. For intracellular labeling, use copper-free alternatives such as SPAAC (strain-promoted azide-alkyne cycloaddition with DBCO/DIBO cyclooctynes) or IEDDA (tetrazine ligation), which proceed rapidly under physiological conditions without toxic catalysts.

How do I verify successful triazole formation?

The 1,4-disubstituted 1,2,3-triazole formed in CuAAC shows a characteristic ¹H NMR singlet at δ 7.5–8.5 ppm (triazole C5-H). In mass spectrometry, look for the expected [M+H]⁺ with a mass equal to the sum of azide + alkyne minus N₂ (28 Da). HPLC analysis should show disappearance of starting materials and a single new product peak.

Last updated: July 27, 2026